Browsing by Author Chang, Jia-Ming
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Date | Title | Author(s) |
---|---|---|
30-May-2016 | Accurate multiple sequence alignment of transmembrane proteins with PSI-Coffee | 張家銘; Chang, Jia-Ming; Notredame, Cedric; Taly, Jean-François; Tommaso, Paolo Di |
27-Apr-2016 | Accurate multiple sequence alignment of transmembrane proteins with PSI-Coffee | Chang, Jia-Ming; 張家銘; Notredame, Cedric; Taly, Jean-François; Tommaso, Paolo Di |
2-Sep-2020 | BigBigTree: 基於Nextflow框架利用分群串接法建立巨量同源基因演化樹 | 蔡漢龍; Tsai, Han-Lung |
10-Apr-2023 | Circulating Exosomal miRNAs as Biomarkers in Epithelial Ovarian Cancer | 張家銘; Chang, Jia-Ming; Shiao, Meng-Shin;Lertkhachonsuk, Arb-Aroon;Rermluk, Naparat;Jinawath, Natini |
5-Oct-2020 | HiCBin:利用 Hi-C 交互網路對總體基因組裝進行反捲積 | 鄭惟文; Cheng, Wei-Wen |
11-Jul-2022 | HiCmapTools: a tool to access HiC contact maps | 張家銘; Chang, Jia-Ming; Weng, Yi-Fu;Chang, Wei-Ting;Lin, Fu-An;Cavalli, Giacomo |
2-Mar-2021 | HiCNextflow:一個靈活且具再現性的Hi-C分析平台 | 鄭博仁; Cheng, Po-Jen |
2-Sep-2021 | HiCSeg:針對不同樣本和物種的互動式基因體分割 | 吳映函; Wu, Yin-Han |
30-May-2016 | Improving the alignment quality of consistency based aligners with an evaluation function using synonymous protein words | 張家銘; Chang, Jia-Ming; Hsu*, Wen-Lian; Sung*, Ting-Yi; Notredame, Cédric; Lin, Hsin-Nan |
5-Mar-2020 | Incorporating alignment uncertainty into Felsenstein’s phylogenetic bootstrap to improve its reliability | 張家銘; Chang, Jia-Ming; Floden, Evan W.; Herrero, Javier; Gascuel, Olivier; Tommaso, Paolo Di; Notredame, Cedric |
20-Sep-2017 | Influence of alignment uncertainty on homology modeling | 張家銘; Chang, Jia-Ming; Notredame, Cedric |
2-Sep-2020 | MS2CNN: Predicting MS/MS spectrum based on protein sequence using deep convolutional neural networks | 張家銘; Chang, Jia-Ming; Lin, Yang Ming; Chen, Ching-Tai |
24-Jul-2018 | Polycomb-Dependent Chromatin Looping Contributes to Gene Silencing during Drosophila Development | Ogiyama, Yuki; Schuettengruber, Bernd; Papadopoulos, Giorgio L.; 張家銘; Chang, Jia-Ming; Cavalli, Giacomo |
27-Apr-2016 | Prediction of nuclear proteins using nuclear translocation signals proposed by probabilistic latent semantic indexing | Su, Emily Chia-Yu; 張家銘; Hsu, Wen-Lian; Sung, Ting-Yi; Cheng, Cheng-Wei; Chang, Jia-Ming |
27-Oct-2020 | PSLCNN: Protein Subcellular Localization Prediction for Eukaryotes and Prokaryotes Using Deep Learning | 張家銘; Chang, Jia-Ming; Chang, Che-Yu; Hsu, Tz-Wei |
27-Apr-2016 | T-Coffee: a web server for the multiple sequence alignment of protein and RNA sequences using structural information and homology extension | Chang, Jia-Ming; 張家銘; Notredame, Cedric; Taly, Jean-François; Montanyola, Alberto; Orobitg, Miquel; Xenarios, Ioannis; Moretti, Sebastien; Tommaso, Di;Paolo |
17-Apr-2018 | TADs are 3D structural units of higher-order chromosome organization in Drosophila | 張家銘; Szabo, Quentin; Jost, Daniel; Chang, Jia-Ming; Cattoni, Diego I. |
2-Sep-2020 | The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens | 張家銘; Chang, Jia-Ming; organization, CAFA3 |
10-Apr-2023 | Topological screen identifies hundreds of Cp190 and CTCF dependent Drosophila chromatin insulator elements | 張家銘; Chang, Jia-Ming; Kahn, Tatyana G., Savitsky, Mikhail;Kuong, Chikuan;Jacquier, Caroline;Cavalli, Giacomo;Schwartz, Yuri B. |
27-Apr-2016 | Using the T-Coffee package to build multiple sequence alignments of protein, RNA, DNA sequences and 3D structures | Chang, Jia-Ming; 張家銘; Notredame, Cedric; Kemena, Carsten; Jose, Espinosa-Carrasco; Erb, Ionas; Tommaso, Paolo Di; Bussotti, Giovanni; Magis, Cedrik; Jean-Francois; Taly |