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題名 An Intelligent Primer Design System for Multiplex Reverse Transcription Polymerase Chain Reaction and Complementary DNA Microarray
作者 蔡瑞煌
Hsieh, Ming-Hua ;
     Tsaih, Ray ;
      Huang, Chiung-Yu
關鍵詞 Intelligent system;Mathematical model;Primer design;Polymerase chain reaction;Microarray
日期 2006-01
上傳時間 17-Jan-2009 15:59:02 (UTC+8)
摘要 Various biological and clinical applications require the quantification of the messenger RNA (mRNA) abundance of the biological materials under investigation. Reverse transcription-polymerase chain reaction (RT-PCR) is a popular technique for mRNA quantification. However, in these applications, multiple quantifications of mRNA are required from the same sample. Multiplex RT-PCR uses multiple primer pairs to amplify the specific targets simultaneously from a single sample. Therefore, multiplex RT-PCR is suitable for such applications. Complementary DNA (cDNA) microarray is a robust and versatile tool that allows researchers to examine the expression of hundreds or thousands of genes for the analysis of gene function, disease diagnosis, and drug discovery. Multiplex RT-PCR is usually performed for the cDNA preparation during the cDNA microarray experiments. Primer design is the most crucial step in multiplex RT-PCR. Therefore, the goal of this study was to implement an intelligent primer design system. The core of the system was based on mathematical techniques. The system can guide users to design cost effective primer collection. The system had also been successfully applied to two real world examples with biological and clinical significance.
關聯 Expert Systems with Applications,30(1), 129-136
資料類型 article
DOI http://dx.doi.org/10.1016/j.eswa.2005.09.055
dc.creator (作者) 蔡瑞煌zh_TW
dc.creator (作者) Hsieh, Ming-Hua ;
     Tsaih, Ray ;
      Huang, Chiung-Yu
-
dc.date (日期) 2006-01en_US
dc.date.accessioned 17-Jan-2009 15:59:02 (UTC+8)-
dc.date.available 17-Jan-2009 15:59:02 (UTC+8)-
dc.date.issued (上傳時間) 17-Jan-2009 15:59:02 (UTC+8)-
dc.identifier.uri (URI) https://nccur.lib.nccu.edu.tw/handle/140.119/26978-
dc.description.abstract (摘要) Various biological and clinical applications require the quantification of the messenger RNA (mRNA) abundance of the biological materials under investigation. Reverse transcription-polymerase chain reaction (RT-PCR) is a popular technique for mRNA quantification. However, in these applications, multiple quantifications of mRNA are required from the same sample. Multiplex RT-PCR uses multiple primer pairs to amplify the specific targets simultaneously from a single sample. Therefore, multiplex RT-PCR is suitable for such applications. Complementary DNA (cDNA) microarray is a robust and versatile tool that allows researchers to examine the expression of hundreds or thousands of genes for the analysis of gene function, disease diagnosis, and drug discovery. Multiplex RT-PCR is usually performed for the cDNA preparation during the cDNA microarray experiments. Primer design is the most crucial step in multiplex RT-PCR. Therefore, the goal of this study was to implement an intelligent primer design system. The core of the system was based on mathematical techniques. The system can guide users to design cost effective primer collection. The system had also been successfully applied to two real world examples with biological and clinical significance.-
dc.format application/en_US
dc.language enen_US
dc.language en-USen_US
dc.language.iso en_US-
dc.relation (關聯) Expert Systems with Applications,30(1), 129-136en_US
dc.subject (關鍵詞) Intelligent system;Mathematical model;Primer design;Polymerase chain reaction;Microarray-
dc.title (題名) An Intelligent Primer Design System for Multiplex Reverse Transcription Polymerase Chain Reaction and Complementary DNA Microarrayen_US
dc.type (資料類型) articleen
dc.identifier.doi (DOI) 10.1016/j.eswa.2005.09.055en_US
dc.doi.uri (DOI) http://dx.doi.org/10.1016/j.eswa.2005.09.055en_US