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Browsing by Author Chang, Jia-Ming


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DateTitleAuthor(s)
30-May-2016Accurate multiple sequence alignment of transmembrane proteins with PSI-Coffee張家銘; Chang, Jia-Ming; Notredame, Cedric; Taly, Jean-François; Tommaso, Paolo Di
27-Apr-2016Accurate multiple sequence alignment of transmembrane proteins with PSI-CoffeeChang, Jia-Ming; 張家銘; Notredame, Cedric; Taly, Jean-François; Tommaso, Paolo Di
2-Sep-2020BigBigTree: 基於Nextflow框架利用分群串接法建立巨量同源基因演化樹蔡漢龍; Tsai, Han-Lung
10-Apr-2023Circulating Exosomal miRNAs as Biomarkers in Epithelial Ovarian Cancer張家銘; Chang, Jia-Ming; Shiao, Meng-Shin;Lertkhachonsuk, Arb-Aroon;Rermluk, Naparat;Jinawath, Natini
5-Oct-2020HiCBin：利用 Hi-C 交互網路對總體基因組裝進行反捲積鄭惟文; Cheng, Wei-Wen
11-Jul-2022HiCmapTools: a tool to access HiC contact maps張家銘; Chang, Jia-Ming; Weng, Yi-Fu;Chang, Wei-Ting;Lin, Fu-An;Cavalli, Giacomo
2-Mar-2021HiCNextflow:一個靈活且具再現性的Hi-C分析平台鄭博仁; Cheng, Po-Jen
2-Sep-2021HiCSeg：針對不同樣本和物種的互動式基因體分割吳映函; Wu, Yin-Han
30-May-2016Improving the alignment quality of consistency based aligners with an evaluation function using synonymous protein words張家銘; Chang, Jia-Ming; Hsu*, Wen-Lian; Sung*, Ting-Yi; Notredame, Cédric; Lin, Hsin-Nan
5-Mar-2020Incorporating alignment uncertainty into Felsenstein’s phylogenetic bootstrap to improve its reliability張家銘; Chang, Jia-Ming; Floden, Evan W.; Herrero, Javier; Gascuel, Olivier; Tommaso, Paolo Di; Notredame, Cedric
20-Sep-2017Influence of alignment uncertainty on homology modeling張家銘; Chang, Jia-Ming; Notredame, Cedric
2-Sep-2020MS2CNN: Predicting MS/MS spectrum based on protein sequence using deep convolutional neural networks張家銘; Chang, Jia-Ming; Lin, Yang Ming; Chen, Ching-Tai
24-Jul-2018Polycomb-Dependent Chromatin Looping Contributes to Gene Silencing during Drosophila DevelopmentOgiyama, Yuki; Schuettengruber, Bernd; Papadopoulos, Giorgio L.; 張家銘; Chang, Jia-Ming; Cavalli, Giacomo
27-Apr-2016Prediction of nuclear proteins using nuclear translocation signals proposed by probabilistic latent semantic indexingSu, Emily Chia-Yu; 張家銘; Hsu, Wen-Lian; Sung, Ting-Yi; Cheng, Cheng-Wei; Chang, Jia-Ming
27-Oct-2020PSLCNN: Protein Subcellular Localization Prediction for Eukaryotes and Prokaryotes Using Deep Learning張家銘; Chang, Jia-Ming; Chang, Che-Yu; Hsu, Tz-Wei
27-Apr-2016T-Coffee: a web server for the multiple sequence alignment of protein and RNA sequences using structural information and homology extensionChang, Jia-Ming; 張家銘; Notredame, Cedric; Taly, Jean-François; Montanyola, Alberto; Orobitg, Miquel; Xenarios, Ioannis; Moretti, Sebastien; Tommaso, Di;Paolo
17-Apr-2018TADs are 3D structural units of higher-order chromosome organization in Drosophila張家銘; Szabo, Quentin; Jost, Daniel; Chang, Jia-Ming; Cattoni, Diego I.
2-Sep-2020The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens張家銘; Chang, Jia-Ming; organization, CAFA3
10-Apr-2023Topological screen identifies hundreds of Cp190 and CTCF dependent Drosophila chromatin insulator elements張家銘; Chang, Jia-Ming; Kahn, Tatyana G., Savitsky, Mikhail;Kuong, Chikuan;Jacquier, Caroline;Cavalli, Giacomo;Schwartz, Yuri B.
27-Apr-2016Using the T-Coffee package to build multiple sequence alignments of protein, RNA, DNA sequences and 3D structuresChang, Jia-Ming; 張家銘; Notredame, Cedric; Kemena, Carsten; Jose, Espinosa-Carrasco; Erb, Ionas; Tommaso, Paolo Di; Bussotti, Giovanni; Magis, Cedrik; Jean-Francois; Taly
Showing results 1 to 20 of 29  next >